PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00135.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 583aa    MW: 63647.1 Da    PI: 6.7854
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00135.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32.1e-30262321159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+
  Migut.I00135.1.p 262 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCAEDMSILITTYEGTHNHP 321
                       58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-31247323IPR003657WRKY domain
SuperFamilySSF1182901.83E-27254323IPR003657WRKY domain
PROSITE profilePS5081128.461257323IPR003657WRKY domain
SMARTSM007741.4E-36262322IPR003657WRKY domain
PfamPF031067.0E-27263321IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 583 aa     Download sequence    Send to blast
METSLQKSDN EGAVKEEKKA SHDSNGDEES CGDDIFLQIG TGKRAQDDDG MKPSSPNQMN  60
LNSCKELDHQ LGSTKAEMEE VMEENQRLKM YLDQILKDYR TLQMQYRDVI QHESKQEHEQ  120
EQEPTDDLIS LTLGRTTSGT ITERTKPERL KTPTFNNNSN FGGGGVESQR LTLGLDSRFN  180
QVPPNKSSPP PPPETASPPA NPSPENSLEE IRQEAGDAWP PKNTKHARSD NISGGDHEEI  240
SQQNPTKRAR VSVRVRCDTP TMNDGCQWRK YGQKIAKGNP CPRAYYRCTV APSCPVRKQV  300
QRCAEDMSIL ITTYEGTHNH PLPMSATAMA STTSAAASML LSGSSTSGTA ATTSTTSSST  360
TLNGLNFYLS SDNSRSKPYY LPNPHWKSNP LPLSWNNGML SYGTSQPLIN KNHQNTPNNN  420
SLSFGQQQQQ QQQQQQHQQP YETLYQSYMQ KNIPNPSQQT LLPQDTLAAA TKAITSDPSF  480
QSALAAALTS IIGSGGPNNN ISTSLANQNL GAKSAQISDQ PFPILSSFPS TSNANKCAPP  540
HLMNKSSSST SAQTRDLMLL SPPFSNSKSK SNSPGDSSKD QV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-20249323174WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839281.10.0PREDICTED: probable WRKY transcription factor 61
TrEMBLA0A022R6K80.0A0A022R6K8_ERYGU; Uncharacterized protein (Fragment)
STRINGSolyc03g113120.2.11e-130(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19452464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-52WRKY DNA-binding protein 72